BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D10SP1|AL428903
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1800 1720 0.0
>3x_Contig1800
Length = 38778
Score = 1720 bits (867), Expect = 0.0
Identities = 868/869 (99%)
Strand = Plus / Plus
Query: 1 gatcttcgcagctttttctgctgtctctgtaacaaaatcgggtaccttcaatggaagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6187 gatcttcgcagctttttctgctgtctctgtaacaaaatcgggtaccttcaatggaagttc 6246
Query: 61 agcttggccccaggcaatttcatgacctgcctttagaacaccagcatcatctttcaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6247 agcttggccccaggcaatttcatgacctgcctttagaacaccagcatcatctttcaacac 6306
Query: 121 ggcaacaacataagttgtatcagaaggaatagtaacagattcttctggctttaaagatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6307 ggcaacaacataagttgtatcagaaggaatagtaacagattcttctggctttaaagatgg 6366
Query: 181 aacgtcgattgtctttcccgtgtccttgtcgataaacaataagtggtctgtcgtaatgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6367 aacgtcgattgtctttcccgtgtccttgtcgataaacaataagtggtctgtcgtaatgaa 6426
Query: 241 gtcgtgcttatttgtgattgttacagatccgtgcgcmattttaatatgaacgggttcaat 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6427 gtcgtgcttatttgtgattgttacagatccgtgcgcaattttaatatgaacgggttcaat 6486
Query: 301 aaccttcttatactctacaaggcccggagtaggattatgctcactgttacacaaaccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6487 aaccttcttatactctacaaggcccggagtaggattatgctcactgttacacaaaccatc 6546
Query: 361 catgatgaacactccgtcatgaacctcttccttaaagtcaccaccataagcataagcttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6547 catgatgaacactccgtcatgaacctcttccttaaagtcaccaccataagcataagcttt 6606
Query: 421 atgcaacttaccatctgcagtactaacatcttcgaattcaataccgtgatttgcccattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6607 atgcaacttaccatctgcagtactaacatcttcgaattcaataccgtgatttgcccattc 6666
Query: 481 ccagataaagccaccttggtaaaacttctccttgtagaacaactcttgatattctttcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6667 ccagataaagccaccttggtaaaacttctccttgtagaacaactcttgatattctttcaa 6726
Query: 541 agagccaggaccgttacccattgcatggccgtactcacacaagatcaaaggcttttcaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6727 agagccaggaccgttacccattgcatggccgtactcacacaagatcaaaggcttttcaaa 6786
Query: 601 cttaccattttcatcagtgtggttcttcctccacctttccataatttcaaatgttgggta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6787 cttaccattttcatcagtgtggttcttcctccacctttccataatttcaaatgttgggta 6846
Query: 661 catgaaactaaagatatctgcactcaaagcgttcaagtcaccctcataatgcacaagtct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6847 catgaaactaaagatatctgcactcaaagcgttcaagtcaccctcataatgcacaagtct 6906
Query: 721 ggtaggatccaattgtttaattaacttgtacatggctttgtggtttctgccataacaagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6907 ggtaggatccaattgtttaattaacttgtacatggctttgtggtttctgccataacaagc 6966
Query: 781 ttcgttacccaaggaccagataataatcgaaggatgattgacatctcttaggacaagttg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6967 ttcgttacccaaggaccagataataatcgaaggatgattgacatctcttaggacaagttg 7026
Query: 841 ggaagctctgtctaagtacgcgacctcgt 869
|||||||||||||||||||||||||||||
Sbjct: 7027 ggaagctctgtctaagtacgcgacctcgt 7055
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5698
Number of Sequences: 1807
Number of extensions: 5698
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)